BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020F03SP1|AL427644
(977 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1598 1902 0.0
>3x_Contig1598
Length = 11902
Score = 1902 bits (958), Expect = 0.0
Identities = 974/978 (99%), Gaps = 2/978 (0%)
Strand = Plus / Plus
Query: 1 gatcgtatttggtaggagtatgacttgtatgagggcttatatctgtgcatgcgatactta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7620 gatcgtatttggtaggagtatgacttgtatgagggcttatatctgtgcatgcgatactta 7679
Query: 61 tcagcactcattctaaaaagacttgtaccgaggattccagagttttaccctacctaccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7680 tcagcactcattctaaaaagacttgtaccgaggattccagagttttaccctacctaccaa 7739
Query: 121 accttgtttgacactattctcttctgtcttttcttttcccgatgttcatttaaaattttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7740 accttgtttgacactattctcttctgtcttttcttttcccgatgttcatttaaaattttc 7799
Query: 181 actttctcctatatataaagacatatttaaaacctggtttttggaaaaaaaattctactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7800 actttctcctatatataaagacatatttaaaacctggtttttggaaaaaaaattctactc 7859
Query: 241 catcatcgttgagtggcgttgcagtattgtttttgactaagatattagtgtttcacttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7860 catcatcgttgagtggcgttgcagtattgtttttgactaagatattagtgtttcacttct 7919
Query: 301 tttgctcaaggtacaaccaagaacacttactcgcgaaatatcaagatgtctgacgttcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7920 tttgctcaaggtacaaccaagaacacttactcgcgaaatatcaagatgtctgacgttcct 7979
Query: 361 cctcctccagctgtcgaagaagaaacctatgamaagccatatgaaaagccatatgaaaag 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 7980 cctcctccagctgtcgaagaagaaacctatgaaaagccatatgaaaagccatatgaaaag 8039
Query: 421 ccatatgaaactgctccaccacctcaaagttatgaaaatttcaataatagagttgatgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8040 ccatatgaaactgctccaccacctcaaagttatgaaaatttcaataatagagttgatgac 8099
Query: 481 gatgaagagctttctgataccagactatttgtgaagcctttccctccagatgtcactgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8100 gatgaagagctttctgataccagactatttgtgaagcctttccctccagatgtcactgat 8159
Query: 541 gctgaaatgaaggaaattttcgaacctttcggtgctttgaaggaaataaagattttaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8160 gctgaaatgaaggaaattttcgaacctttcggtgctttgaaggaaataaagattttaaat 8219
Query: 601 gggttcgcttttgttgagtttgaagaagctgagtctgcttcccaagctattcaaaacgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8220 gggttcgcttttgttgagtttgaagaagctgagtctgcttcccaagctattcaaaacgtt 8279
Query: 661 gccggtaaaatgtttgccgactacccattggaagttgtattttccaagaagttaaagcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8280 gccggtaaaatgtttgccgactacccattggaagttgtattttccaagaagttaaagcca 8339
Query: 721 agattcagagtcattatcagaaacttgccagaaggctgtgcttggcaagaattgaaggat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8340 agattcagagtcattatcagaaacttgccagaaggctgtgcttggcaagaattgaaggat 8399
Query: 781 ttggccagagataaccagttagaaactactttctccagtgtcaacaccagagactttgac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8400 ttggccagagataaccagttagaaactactttctccagtgtcaacaccagagactttgac 8459
Query: 841 ggtactggtgctcttgaattcccaaccgaagagatcctgcaggaagccattgaaaagttg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8460 ggtactggtgctcttgaattcccaaccgaagagatcctgcaggaagccattgaaaagttg 8519
Query: 901 aacaacatcgaattccgtggttcagttttgggctgttgaaaaagatgaaaa-ccaccacc 959
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 8520 aacaacatcgaattccgtggttcagtttt-ggctgttgaaaaagatgaaaacccaccacc 8578
Query: 960 aatcagatyctctcgtgg 977
|||||||| |||||||||
Sbjct: 8579 aatcagatcctctcgtgg 8596
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9360
Number of Sequences: 1807
Number of extensions: 9360
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 977
length of database: 10,358,551
effective HSP length: 16
effective length of query: 961
effective length of database: 10,329,639
effective search space: 9926783079
effective search space used: 9926783079
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)